Cell potency rapidly decreases during gastrulation and formation of the three germ layers each giving rise to specific lineages. However CNCC challenge this paradigm as they possess a superior developmental potential – broader than that of ectodermal germ layer of origin
We combined scRNA-seq of CNCC from from 4 to 10 somite stages of development corresponding to CNCC induction, delamination and first differentiation decisions, with the follow-up in vivo scRNA-seq validation, lineage tracing, loss-of-function and epigenomic profiling experiments
e first showed pre-migratory CNCC form distinct subpopulations with anterior-posterior information reflective of their site of origin in the neuroepithelium. However this positional information is rapidly erased with delaminating CNCC presenting a uniform molecular signature
We speculate formation a transcriptionally (and likely also functionally) equivalent population, allow CNCC to later adapt to environmental cues.
We hope this will reconcile the controversy of whether CNCC are heterogenous or homogenous at first
Next we identified a CNCC precursor population characterized by expression of canonical pluripotency transcription factors Oct4, Nanog, Klf4 and Sox2. Expression of these factors – in particular Oct4 and Nanog – is extremely dynamic along the AP axis of the embryo
scRNAseq analysis predicted that rather than being maintained from the epiblast, pluripotency factors are transiently reactivated in the prospective CNCC following head-folds formation. This was confirmed in vivo using FISH, in vivo GFP reporter
Furthermore in vivo lineage tracing confirmed Oct4 expressing cells gives rise to CNCC and craniofacial structures
Using mouse mutants, we demonstrated Oct4 is essential for facial mesenchyme specification and survival, directly linking this pluripotency factor with CNCC cellular potential expansion and reprogramming
We further showed that open chromatin landscapes of Oct4+ CNCC progenitors broadly resemble those of pluripotent epiblast stem cells, with additional features of priming for mesenchymal programs
These results demonstrate that CNCC precursors transiently reactivate pluripotency programs and suggest that these cells undergo a natural in vivo reprogramming event – at least partly mediated by Oct4 – that allows them to climb uphill on Waddington’s epigenetic landscape
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